From: What are the effects of herbivore diversity on tundra ecosystems? A systematic review protocol
Topic | Coding variable | Variable description | Source |
---|---|---|---|
Article ID | author_list | List of authors | P |
title | Title of the publication | P | |
year | Year of publication | P | |
journal | Journal or publishing house | P | |
language | Language of the publication | P | |
study_ID | Unique ID number for study | C | |
searchable_pdf | Whether the document allows for automated text searches | P | |
Study location | country | Country or region name | P |
locality | Site name describing the locality, as specified in the study | P | |
coordinate_source | Whether coordinates are provided in the text, based on maps, figures or place names | P | |
coordinates_N, coordinates_E | Geographic coordinates in decimal degrees | P | |
elevation | Elevation (m a.s.l.) | P | |
elevation_DEM | Elevation (m a.s.l.) extracted from digital elevation model | D | |
Study type | study_design | Whether the study involves experimental manipulations, observational approaches or whether the study design is unclear | C |
diversity_contrast | Approach used to create or assess the difference in herbivore diversity, such as exclosures or spatial contrasts | C | |
size_selective_exclosures | Does the study use different exclosures that prevent access of different sized herbivores? | C | |
spatial_extent | Size of the study area | C | |
spatial_resolution | Spatial scale at which the outcome is reported for each study | C | |
temporal_resolution | Interval between measurements of the outcome | C | |
sampling_frequency | Frequency of measurements | C | |
year_start | Year when the study started | P | |
year_end | Year when the study finished | P | |
Exposure and comparator | herbivore_data | How is the composition of the herbivore assemblages assessed? | C |
herbivore_ID_higher_diversity | Species (or group) list in the areas with higher herbivore diversity | P | |
herbivore_ID_lower_diversity | Species (or group) list in the areas with lower herbivore diversity | P | |
Outcome | measured_response_variable | What was measured in areas exposed to different herbivore diversity? | P/C |
reported_units | Units in which the response variable is reported; "unitless" if there is no unit | P | |
value_higher_diversity | Value of the outcome in the higher diversity area | P | |
value_lower_diversity | Value of the outcome in the lower diversity area | P | |
value_type | Does the value refer to the mean, median, etc | P | |
variability_higher_diversity | Variability of the outcome in the higher diversity area | P | |
variability_lower_diversity | Variability of the outcome in the lower diversity area | P | |
variability_type | Type of variability measurement (SE, confidence intervals (CI), etc.) | P | |
sample_size_higher_diversity | Number of observations in the higher diversity area | P | |
sample_size_lower diversity | Number of observations in the lower diversity area | P | |
effect_size | Value of the comparison between areas with different diversity | P | |
effect_size_variability | Variability of the comparison | P | |
effect_size_variability_type | Type of variability measurement (SE, confidence intervals (CI), etc.) | P | |
effect_size_direction | Direction of the comparison, or unclear | C | |
effect_size_sample_size | Number of observations for the comparison if reported | P | |
effect_size_type | Type of comparison (e.g. model estimate) | C | |
effect_size_comments | Any additional comments | C | |
statistical_test | Type of statistical test reported (e.g. paired t-test) | P | |
statistical_test_value | Value of the test statistic | P | |
statistical_test_df | Degrees of freedom of the statistic | P | |
statistical_test_p | p-value of the statistical test | P | |
outcome_comments | Any additional comments | C | |
more_data | Is there data available in the paper that is not extractable in its current form? | C | |
Study validity assessment | bias_risk_criterion1 | Biases due to uncontrolled confounding variables that influence both the herbivore diversity levels and the response variable | C |
bias_risk_criterion2 | Biases arising from systematic differences in the selection of areas into the study or analyses after treatment | C | |
bias_risk_criterion3or4 | Biases arising from misclassification or measurement of contrasts of herbivore diversity (observational studies) or treatments (experimental studies) | C | |
bias_risk_criterion5 | Biases arising from systematic differences in measurements of outcomes | C | |
bias_risk_criterion6 | Biases in reporting of study findings | C | |
bias_risk_criterion7 | Biases due to error in applied statistical methods | C | |
bias_risk_comments | Please indicate any relevant comments; if there were confounding variables please report them here | C | |
Context | distance_to_treeline | Distance (km) to southern border of arctic subzone E | D |
distance_from_coast | Distance (km) to the coast | D | |
bioclimatic_zone | Bioclimatic zone A to E, or "other" | D | |
temperature | Temperature related variable(s) extracted from WorldClim | D | |
precipitation | Precipitation related variable(s) extracted from Worldclim | D | |
growing_season | Duration of growing season (days) | D | |
productivity | Value of NDVI (vegetation greenness) | D | |
recent_warming | Extent of recent warming | D | |
recent_greening | Extent of recent greening | D | |
extent_of_recent__change | Extent of recent change in growing season length | D | |
soil_chemistry | Soil chemistry | C | |
soil_texture | Broad categories of soil texture | C | |
soil_moisture | Soil moisture as described in the study | C | |
soil_type | Soil type as reported by the authors | P | |
soil_type_D | Soil type | D | |
permafrost | Presence of permafrost | C | |
permafrost_D | Presence of permafrost | D | |
habitat_type | Habitat types using the broad categories defined in CAVM | C | |
habitat_type_D | Habitat types | D | |
management_focus | Whether the study is framed within a management context | C | |
conservation_focus | Whether the study is framed within a conservation context | C |